Phenol-containing compound catabolic process

pathway activity — cross-omics
GO:0019336Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Phenol-containing compound catabolic process pathway is significantly associated with the RNA expression of multiple genes, with the UCEC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are C7, TICRR, and ABCA8, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Phenol-containing compound catabolic process activity versus C7 in UCEC (Pearson r = 0.13).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECC7 →+1.383+0.145.002<.00136
UCECTICRR →-0.719-0.198.007<.00136
UCECABCA8 →+1.107+0.136<.001<.00136
UCECKIF2C →-1.148-0.211.001<.00136
UCECCDCA5 →-1.201-0.208<.001<.00136
BRCACD300LG →+0.716+0.167<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0019336 vs C7 — UCEC

Per-sample scatter of Phenol-containing compound catabolic process activity vs C7 in UCEC.

Explore this scatter interactively →

Exploration