Sensory perception of pain

pathway activity — cross-omics
GO:0019233Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Sensory perception of pain pathway is significantly associated with the protein abundance of multiple proteins, with the PDAC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are TRMT61A, TYMP, and AHCY, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Sensory perception of pain activity versus TRMT61A in PDAC (Pearson r = -0.17).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACTRMT61A →-0.363-0.027<.001<.00135
GBMTYMP →+0.500+0.031.001.00435
LSCCAHCY →-0.381-0.031<.001.00335
PDACTLE3_S203 →-0.388-0.024.002.00835
PDACRBM14_T206 →-0.564-0.024<.001<.00135
OVTAP1 →+0.448+0.030.007.00235
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0019233 vs TRMT61A — PDAC

Per-sample scatter of Sensory perception of pain activity vs TRMT61A in PDAC.

Explore this scatter interactively →

Exploration