Ether metabolic process

pathway activity — cross-omics
GO:0018904Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Ether metabolic process pathway is significantly associated with the RNA expression of multiple genes, with the LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are PLA2G4A, C1orf198, and SLC31A1, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADPLA2G4A →+1.683+0.184<.001<.00137
GBMC1orf198 →+0.458+0.135.009<.00134
OVSLC31A1 →+0.574+0.216.006.00534
GBMZNF385A →+0.540+0.140<.001.00334
GBMMAPKAPK2 →+0.305+0.174.004.00225
GBMSAA1 →+1.988+0.157.002.00234
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration