Female meiosis chromosome segregation

pathway activity — cross-omics
GO:0016321Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Female meiosis chromosome segregation pathway is significantly associated with the RNA expression of multiple genes, with the LSCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are MIS18A, TEDC2, and CDC25A, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCMIS18A →+0.725+1.125<.001<.00136
UCECTEDC2 →+0.977+0.822<.001.00136
UCECCDC25A →+0.863+0.853<.001<.00136
BRCAEXO1 →+0.853+0.737<.001<.00136
UCECCCNB1 →+1.096+0.864<.001<.00136
UCECCHEK1 →+0.784+0.819<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration