Glial cell proliferation

pathway activity — cross-omics
GO:0014009Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Glial cell proliferation pathway is significantly associated with the protein abundance of multiple proteins, with the CCRCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are F13A1, COL6A3, and RSU1, each associated with the pathway in up to 8 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Glial cell proliferation activity versus F13A1 in CCRCC (Pearson r = 0.35).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCF13A1 →+0.598+0.046<.001<.00138
LSCCCOL6A3 →+0.371+0.047<.001<.00137
UCECRSU1 →+0.407+0.055.001.00937
BRCASELL →+0.447+0.025<.001<.00137
BRCASERPING1 →+0.635+0.041<.001<.00137
LSCCSP100_S171 →+0.598+0.056<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0014009 vs F13A1 — CCRCC

Per-sample scatter of Glial cell proliferation activity vs F13A1 in CCRCC.

Explore this scatter interactively →

Exploration