Regulation of translational initiation by eIF2 alpha phosphorylation

pathway activity — cross-omics
GO:0010998Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Regulation of translational initiation by eIF2 alpha phosphorylation pathway is significantly associated with the RNA expression of multiple genes, with the LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are FOXM1, DEPDC1, and CDKN3, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADFOXM1 →+1.186+0.199<.001<.00137
LUADDEPDC1 →+1.132+0.187<.001<.00137
PDACCDKN3 →+0.708+0.370<.001<.00137
LUADKIF20A →+1.284+0.212<.001<.00137
LUADCKAP2L →+0.760+0.141<.001.00237
LUADTTK →+1.201+0.190<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration