Positive regulation of cell morphogenesis

pathway activity — cross-omics
GO:0010770Cross-omicsPROTEIN-MS → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Positive regulation of cell morphogenesis pathway is significantly associated with the RNA expression of multiple genes, with the BLOOD_Leukemia cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are TSPO, ZNF324, and ARHGAP33, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Positive regulation of cell morphogenesis activity versus TSPO in BLOOD_Leukemia (Pearson r = -0.33).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaTSPO →-2.154-0.178.005.00236
SOFT_TISSUEZNF324 →+0.721+0.178.004.00735
SOFT_TISSUEARHGAP33 →+1.529+0.251.001.00735
OVARYTMCC1 →+1.021+0.218<.001.00235
BREASTTNRC6C →+1.304+0.218<.001.00435
URINARY_TRACTDTYMK →-0.857-0.333.003.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0010770 vs TSPO — BLOOD_Leukemia

Per-sample scatter of Positive regulation of cell morphogenesis activity vs TSPO in BLOOD_Leukemia.

Explore this scatter interactively →

Exploration