Negative regulation of cardiac muscle adaptation

pathway activity — cross-omics
GO:0010616Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Negative regulation of cardiac muscle adaptation pathway is significantly associated with the RNA expression of multiple genes, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are IGFBP7, TPM2, and FOXO1, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Negative regulation of cardiac muscle adaptation activity versus IGFBP7 in GBM (Pearson r = 0.40).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMIGFBP7 →+1.018+0.223<.001<.00137
BRCATPM2 →+1.297+0.331<.001<.00137
GBMFOXO1 →+0.351+0.108.007.00937
BRCAMYL9 →+1.403+0.331<.001<.00136
LUADPDLIM2 →+0.482+0.242<.001<.00136
BRCATAGLN →+1.388+0.278<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0010616 vs IGFBP7 — GBM

Per-sample scatter of Negative regulation of cardiac muscle adaptation activity vs IGFBP7 in GBM.

Explore this scatter interactively →

Exploration