Positive regulation of cardiac muscle adaptation

pathway activity — cross-omics
GO:0010615Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Positive regulation of cardiac muscle adaptation pathway is significantly associated with the protein abundance of multiple proteins, with the COAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are LYRM1, DNM2, and AK2, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADLYRM1 →+0.369+0.150.003<.00135
LUADDNM2 →+0.235+0.132<.001<.00134
LUADAK2 →+0.275+0.095.004.00134
OVPKP2_S135 →+1.177+0.094.002.00233
LUADRPTOR →+0.120+0.097.003.00133
LUADSHANK2_S67 →-0.599-0.114.006<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration