Regulation of lamellipodium assembly

Across TCGA patient cohorts, RNA activity of the Regulation of lamellipodium assembly pathway is significantly associated with the RNA expression of multiple genes, with the UCEC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are BYSL, PTPRB, and TACC1, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Regulation of lamellipodium assembly activity versus BYSL in UCEC (Pearson r = -0.25).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	BYSL →	-0.691	-0.180	.004	.001	3	5
UCEC	PTPRB →	+0.753	+0.214	<.001	<.001	3	5
UCEC	TACC1 →	+0.826	+0.178	<.001	.003	3	5
UCEC	SPC25 →	-0.918	-0.207	<.001	<.001	3	5
UCEC	ADGRL4 →	+0.647	+0.200	<.001	.001	3	5
LSCC	POLR1C →	-0.512	-0.101	.003	.002	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0010591 vs BYSL — UCEC

Explore this scatter interactively →