Regulation of activation of Janus kinase activity

pathway activity — cross-omics
GO:0010533Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Regulation of activation of Janus kinase activity pathway is significantly associated with the RNA expression of multiple genes, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are P2RX1, LINC00528, and CSF2RB, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMP2RX1 →+0.460+0.175<.001.00135
BRCALINC00528 →+0.438+0.140.001<.00135
GBMCSF2RB →+0.672+0.181<.001<.00134
BRCACD40 →+0.634+0.106.004.00234
GBMPTPN6 →+0.707+0.191.001.00134
GBMPLEK →+0.791+0.144<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration