Response to selenium ion

Across TCGA patient cohorts, RNA activity of the Response to selenium ion pathway is significantly associated with the RNA expression of multiple genes, with the LSCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are MYL9, DOCK2, and LMOD1, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Response to selenium ion activity versus MYL9 in LSCC (Pearson r = 0.30).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	MYL9 →	+0.848	+0.159	.002	<.001	2	6
UCEC	DOCK2 →	+0.591	+0.104	.008	.006	3	5
OV	LMOD1 →	+0.903	+0.093	.004	.008	3	5
LSCC	MRGPRF →	+0.421	+0.133	.001	<.001	3	5
LSCC	MSRB3 →	+0.745	+0.131	.001	.003	3	5
OV	SELENOW →	+0.696	+0.131	.003	.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0010269 vs MYL9 — LSCC

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