Response to UV-B

pathway activity — cross-omics
GO:0010224Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Response to UV-B pathway is significantly associated with the protein abundance of multiple proteins, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are TIMP2, SRP68, and PLCD1, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Response to UV-B activity versus TIMP2 in BRCA (Pearson r = 0.36).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCATIMP2 →+0.676+0.047<.001<.00137
BRCASRP68 →-0.243-0.036<.001.00237
BRCAPLCD1 →+0.391+0.034<.001<.00137
COADPTCD3 →-0.272-0.027<.001<.00136
BRCASEPTIN2 →+0.230+0.038<.001<.00136
BRCAUTRN →+0.205+0.036<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0010224 vs TIMP2 — BRCA

Per-sample scatter of Response to UV-B activity vs TIMP2 in BRCA.

Explore this scatter interactively →

Exploration