Embryonic body morphogenesis

pathway activity — cross-omics
GO:0010172Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Embryonic body morphogenesis pathway is significantly associated with the RNA expression of multiple genes, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are TGFB1I1, ZCCHC24, and CALHM5, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Embryonic body morphogenesis activity versus TGFB1I1 in OV (Pearson r = -0.15).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVTGFB1I1 →+0.821+0.524<.001<.00137
PDACZCCHC24 →+0.691+0.899<.001<.00137
OVCALHM5 →+0.737+0.640<.001<.00137
OVDDR2 →+1.245+0.647<.001<.00137
COADMSRB3 →+1.007+0.520<.001.00137
PDACTCEAL7 →+0.662+1.102<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0010172 vs TGFB1I1 — OV

Per-sample scatter of Embryonic body morphogenesis activity vs TGFB1I1 in OV.

Explore this scatter interactively →

Exploration