Cardioblast differentiation

pathway activity — cross-omics
GO:0010002Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Cardioblast differentiation pathway is significantly associated with the RNA expression of multiple genes, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are FBN1, BGN, and OLFML1, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Cardioblast differentiation activity versus FBN1 in BRCA (Pearson r = 0.25).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAFBN1 →+1.121+0.541<.001.00236
GBMBGN →+1.101+0.430<.001<.00136
BRCAOLFML1 →+0.828+0.462<.001.00336
CCRCCCARMN →+0.596+0.481.003<.00136
HNSCCD34 →+0.510+0.458<.001.00136
UCECCXCL12 →+0.850+0.396.001.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0010002 vs FBN1 — BRCA

Per-sample scatter of Cardioblast differentiation activity vs FBN1 in BRCA.

Explore this scatter interactively →

Exploration