Detection of light stimulus

Across TCGA patient cohorts, RNA activity of the Detection of light stimulus pathway is significantly associated with the RNA expression of multiple genes, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are DYNLL1P7, LRRC73, and RASD1, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Detection of light stimulus activity versus DYNLL1P7 in GBM (Pearson r = 0.24).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	DYNLL1P7 →	+0.214	+0.359	<.001	.006	3	4
LUAD	LRRC73 →	+0.393	+0.200	.003	.004	3	4
CCRCC	RASD1 →	-0.929	-0.205	.005	.008	3	3
CCRCC	GPR161 →	-0.363	-0.195	.006	.003	3	3
GBM	DUSP26 →	+1.262	+0.365	<.001	.003	3	3
LSCC	RNF217 →	-0.565	-0.176	.003	.005	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0009583 vs DYNLL1P7 — GBM

Explore this scatter interactively →