Response to water deprivation

pathway activity — cross-omics
GO:0009414Cross-omicsPROTEIN-MS → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Response to water deprivation pathway is significantly associated with the RNA expression of multiple genes, with the LUNG_SCLC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CPNE6, CSTF2, and CHRDL1, each associated with the pathway in up to 1 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Response to water deprivation activity versus CPNE6 in LUNG_SCLC (Pearson r = 0.81).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCCPNE6 →+1.299+1.714<.001.00431
LUNG_SCLCCSTF2 →+0.875+1.737.005.00431
LUNG_SCLCCHRDL1 →+4.630+1.761.005.00231
LUNG_SCLCUTP18 →+0.473+1.605.009<.00131
LUNG_SCLCROMO1 →+1.031+1.605.006<.00131
LUNG_SCLCSRD5A3 →+1.071+1.605.005<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0009414 vs CPNE6 — LUNG_SCLC

Per-sample scatter of Response to water deprivation activity vs CPNE6 in LUNG_SCLC.

Explore this scatter interactively →

Exploration