Intrinsic apoptotic signaling pathway in response to osmotic stress

pathway activity — cross-omics
GO:0008627Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Intrinsic apoptotic signaling pathway in response to osmotic stress pathway is significantly associated with the protein abundance of multiple proteins, with the COAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are C4BPA, PTGS2, and PRPF38B_S529, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADC4BPA →+0.697+0.038<.001<.00136
COADPTGS2 →+1.550+0.046<.001<.00136
LUADPRPF38B_S529 →-0.524-0.085<.001<.00127
COADPPP1R18_S368 →+0.593+0.049<.001<.00135
COADPYGL →+0.477+0.044<.001<.00135
LSCCPDS5B_S1182 →-0.450-0.089<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration