Histone mRNA metabolic process

Across TCGA patient cohorts, RNA activity of the Histone mRNA metabolic process pathway is significantly associated with the RNA expression of multiple genes, with the UCEC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are F10, DEPDC1B, and BGN, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Histone mRNA metabolic process activity versus F10 in UCEC (Pearson r = 0.23).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	F10 →	-0.537	-0.184	.007	.005	3	5
LUAD	DEPDC1B →	+0.503	+0.152	.004	.001	3	5
BRCA	BGN →	-1.038	-0.233	.001	.003	3	5
BRCA	CYBRD1 →	-1.003	-0.200	.005	.001	3	5
BRCA	C1QTNF7 →	-0.599	-0.201	.002	<.001	3	5
BRCA	ADAM12 →	-1.063	-0.220	.003	.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0008334 vs F10 — UCEC

Explore this scatter interactively →