G2/MI transition of meiotic cell cycle

pathway activity — cross-omics
GO:0008315Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the G2/MI transition of meiotic cell cycle pathway is significantly associated with the RNA expression of multiple genes, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are KIF2C, FEN1, and MCM10, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAKIF2C →+0.936+0.319<.001<.00137
LSCCFEN1 →+0.967+0.532<.001<.00137
LSCCMCM10 →+0.919+0.434<.001<.00137
BRCAPRR11 →+0.903+0.282<.001<.00137
LSCCCDC6 →+1.181+0.549<.001<.00137
BRCACDKN3 →+0.797+0.288<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration