Protein kinase C-activating G protein-coupled receptor signaling pathway

pathway activity — cross-omics
GO:0007205Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Protein kinase C-activating G protein-coupled receptor signaling pathway pathway is significantly associated with the RNA expression of multiple genes, with the HNSC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are PRODH, STMN2, and ULBP3, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCPRODH →+0.774+0.272<.001.00534
GBMSTMN2 →+1.878+0.833<.001<.00134
BRCAULBP3 →+0.606+0.491.003.00634
GBMSTYK1 →+0.902+1.170<.001<.00134
BRCAPREB →+0.410+0.602<.001.00134
HNSCPARD3 →+1.246+0.542<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration