Regulation of epidermal growth factor-activated receptor activity

pathway activity — cross-omics
GO:0007176Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Regulation of epidermal growth factor-activated receptor activity pathway is significantly associated with the RNA expression of multiple genes, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are GARNL3, FCGR2A, and RNA5SP123, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMGARNL3 →-0.450-0.732<.001<.00135
GBMFCGR2A →+0.661+0.710<.001<.00135
GBMRNA5SP123 →-0.554-0.816<.001<.00135
GBMANXA2P2 →+0.495+0.538<.001.00435
GBMCLEC2B →+0.767+0.775<.001<.00134
GBMSPP1 →+1.091+0.779.001.00334
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration