Female meiosis I

pathway activity — cross-omics
GO:0007144Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Female meiosis I pathway is significantly associated with the RNA expression of multiple genes, with the LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are GINS1, CENPI, and DDIAS, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Female meiosis I activity versus GINS1 in LUAD (Pearson r = 0.01).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADGINS1 →+0.940+0.653<.001<.00136
LUADCENPI →+0.970+0.668<.001<.00136
BRCADDIAS →+0.964+0.639<.001.00136
LUADNCAPG →+0.685+0.447<.001<.00136
BRCATTK →+1.416+0.528<.001<.00136
BRCACENPA →+1.241+0.459<.001.00636
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0007144 vs GINS1 — LUAD

Per-sample scatter of Female meiosis I activity vs GINS1 in LUAD.

Explore this scatter interactively →

Exploration