Microtubule depolymerization

pathway activity — cross-omics
GO:0007019Cross-omicsPROTEIN-MS → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Microtubule depolymerization pathway is significantly associated with the RNA expression of multiple genes, with the UPPER_AERODIGESTIVE_TRACT cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are OVOL1, CENPS, and UHRF1, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Microtubule depolymerization activity versus OVOL1 in UPPER_AERODIGESTIVE_TRACT (Pearson r = -0.64).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UPPER_AERODIGESTIVE_TRACTOVOL1 →-0.924-1.213.001.00126
LARGE_INTESTINECENPS →+0.578+0.786.001<.00135
OVARYUHRF1 →+1.424+0.761<.001.00635
PANCREASCAMLG →+0.837+0.424.002.00935
PANCREASNAP1L1 →+0.892+0.291.001.00335
URINARY_TRACTZNF428 →+2.202+2.157.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0007019 vs OVOL1 — UPPER_AERODIGESTIVE_TRACT

Per-sample scatter of Microtubule depolymerization activity vs OVOL1 in UPPER_AERODIGESTIVE_TRACT.

Explore this scatter interactively →

Exploration