"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"

pathway activity — cross-omics
GO:0006977Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the "DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest" pathway is significantly associated with the protein abundance of multiple proteins, with the LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are RRM2_S20, BUB1B_S543, and NASP_S244, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADRRM2_S20 →+1.346+0.053<.001<.00137
UCECBUB1B_S543 →+0.791+0.096.007.00336
BRCANASP_S244 →+0.878+0.027.001.00136
GBMRRM2 →+0.890+0.054<.001<.00135
LUADTACC3_S434 →+0.743+0.050<.001<.00135
HNSCCAD_S1859 →+0.354+0.082.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration