Syncytium formation

pathway activity — cross-omics
GO:0006949Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Syncytium formation pathway is significantly associated with the RNA expression of multiple genes, with the HNSC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are BTK, MS4A6A, and GMFG, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCBTK →+0.789+0.285<.001.00536
GBMMS4A6A →+0.832+0.502.001<.00136
GBMGMFG →+0.891+0.671<.001<.00136
GBMKLHL6 →+0.846+0.650<.001<.00136
LSCCGAPT →+0.486+0.446.008<.00136
GBMNCF1B →+0.678+0.514<.001.00136
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration