Regulation of striated muscle contraction

Across TCGA patient cohorts, RNA activity of the Regulation of striated muscle contraction pathway is significantly associated with the RNA expression of multiple genes, with the UCEC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are NUF2, FAM72B, and UBE2T, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Regulation of striated muscle contraction activity versus NUF2 in UCEC (Pearson r = -0.44).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	NUF2 →	-0.869	-0.225	<.001	<.001	3	5
OV	FAM72B →	-0.743	-0.295	.002	.005	3	5
UCEC	UBE2T →	-0.920	-0.182	<.001	<.001	3	5
LSCC	MPZL2 →	+0.659	+0.321	.004	.004	3	5
UCEC	E2F1 →	-0.659	-0.128	.003	.003	3	4
UCEC	NEK2 →	-1.018	-0.189	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0006942 vs NUF2 — UCEC

Explore this scatter interactively →