Cellular component disassembly involved in execution phase of apoptosis

pathway activity — cross-omics
GO:0006921Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Cellular component disassembly involved in execution phase of apoptosis pathway is significantly associated with the RNA expression of multiple genes, with the LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are GINS1, NUF2, and AUNIP, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Cellular component disassembly involved in execution phase of apoptosis activity versus GINS1 in LUAD (Pearson r = 0.31).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADGINS1 →+0.778+0.156<.001.00137
UCECNUF2 →+1.188+0.289<.001<.00137
GBMAUNIP →+0.784+0.348<.001<.00137
UCECKIF15 →+1.036+0.253.002.00137
GBMDEPDC1 →+0.867+0.273<.001<.00137
UCECL2HGDH →+0.665+0.358<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0006921 vs GINS1 — LUAD

Per-sample scatter of Cellular component disassembly involved in execution phase of apoptosis activity vs GINS1 in LUAD.

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Exploration