Activation of cysteine-type endopeptidase activity involved in apoptotic process

pathway activity — cross-omics
GO:0006919Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Activation of cysteine-type endopeptidase activity involved in apoptotic process pathway is significantly associated with the protein abundance of multiple proteins, with the LSCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are RCSD1, DOK2, and CORO1A, each associated with the pathway in up to 8 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCRCSD1 →+0.507+0.043<.001<.00138
LSCCDOK2 →+0.468+0.045<.001<.00138
LSCCCORO1A →+0.548+0.047<.001<.00138
GBMHCLS1 →+0.493+0.030<.001<.00138
LSCCIL16 →+0.534+0.050<.001<.00138
GBMDEF6 →+0.431+0.030<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration