Histidine metabolic process

pathway activity — cross-omics
GO:0006547Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Histidine metabolic process pathway is significantly associated with the RNA expression of multiple genes, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are NEXN, DCN, and SCN7A, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVNEXN →+0.975+0.102.007.00425
BRCADCN →+1.220+0.092<.001<.00134
BRCASCN7A →+0.532+0.053.005.00534
BRCAZEB1 →+0.826+0.089.001<.00134
BRCATGFBR2 →+0.768+0.077.004<.00134
BRCASGCD →+0.882+0.071<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration