Obsolete ethanol oxidation

pathway activity — cross-omics
GO:0006069Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Obsolete ethanol oxidation pathway is significantly associated with the RNA expression of multiple genes, with the LSCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are ADH1C, ADH1B, and CAVIN2, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCADH1C →+1.566+0.096.004.00327
OVADH1B →+2.453+0.314<.001<.00135
OVCAVIN2 →+0.900+0.233.001.00135
PDACLOXL2 →-0.751-0.146.009.00734
LUADSLC16A3 →-0.488-0.090<.001.00334
LSCCGPC3 →+1.360+0.150.004<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration