Wnt signaling pathway involved in heart development

pathway activity — cross-omics
GO:0003306Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Wnt signaling pathway involved in heart development pathway is significantly associated with the RNA expression of multiple genes, with the HNSC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are HPS4, WDR59, and RNF43, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCHPS4 →+0.464+0.140.001<.00135
HNSCWDR59 →+0.360+0.169<.001.00134
HNSCRNF43 →+0.439+0.171.007.00134
HNSCPATJ →+0.498+0.186<.001<.00134
HNSCPPP1R21 →+0.489+0.154.006.00434
HNSCBRD7 →+0.328+0.126.002.00234
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration