Synoviocyte proliferation

pathway activity — cross-omics
GO:0002941Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Synoviocyte proliferation pathway is significantly associated with the RNA expression of multiple genes, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are ZBP1, GBP5, and CXCR2P1, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAZBP1 →+1.143+0.634<.001<.00136
BRCAGBP5 →+1.555+0.673<.001<.00135
BRCACXCR2P1 →+1.583+0.716<.001<.00135
BRCAFCRL3 →+0.907+0.717<.001<.00135
BRCAMEI1 →+0.656+0.515<.001<.00135
BRCACD300LF →+0.802+0.598<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration