Regulation of humoral immune response mediated by circulating immunoglobulin

pathway activity — cross-omics
GO:0002923Cross-omicsRNA → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Regulation of humoral immune response mediated by circulating immunoglobulin pathway is significantly associated with the RNA expression of multiple genes, with the SARC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CYTH4, CD86, and GPR84, each associated with the pathway in up to 23 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Regulation of humoral immune response mediated by circulating immunoglobulin activity versus CYTH4 in SARC (Pearson r = 0.07).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SARCCYTH4 →+1.608+0.056<.001<.001323
SARCCD86 →+1.640+0.055<.001<.001322
SARCGPR84 →+1.252+0.046<.001<.001322
SKCMFGD2 →+1.279+0.076<.001<.001322
SKCMWAS →+1.816+0.079<.001<.001322
SKCMNCF1 →+1.628+0.078<.001<.001322
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0002923 vs CYTH4 — SARC

Per-sample scatter of Regulation of humoral immune response mediated by circulating immunoglobulin activity vs CYTH4 in SARC.

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Exploration