Regulation of humoral immune response

pathway activity — cross-omics
GO:0002920Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Regulation of humoral immune response pathway is significantly associated with the protein abundance of multiple proteins, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are IL16, ARPC2, and ARPC5, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Regulation of humoral immune response activity versus IL16 in GBM (Pearson r = 0.26).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMIL16 →+0.614+0.095<.001<.00137
GBMARPC2 →+0.288+0.073<.001<.00136
GBMARPC5 →+0.347+0.072<.001<.00136
LSCCSASH3_S97 →+0.816+0.067<.001<.00136
LSCCSEPTIN1_S315 →+1.252+0.072<.001<.00136
LSCCSERPINB9 →+0.541+0.068<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0002920 vs IL16 — GBM

Per-sample scatter of Regulation of humoral immune response activity vs IL16 in GBM.

Explore this scatter interactively →

Exploration