Positive regulation of T-helper 1 type immune response

pathway activity — cross-omics
GO:0002827Cross-omicsPROTEIN-MS → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Positive regulation of T-helper 1 type immune response pathway is significantly associated with the RNA expression of multiple genes, with the LUNG_NSCLC_LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CDR2L, STK19, and NELFE, each associated with the pathway in up to 2 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Positive regulation of T-helper 1 type immune response activity versus CDR2L in LUNG_NSCLC_LUAD (Pearson r = 0.40).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUADCDR2L →+1.199+0.363.004.00932
LUNG_NSCLC_LUADSTK19 →-0.617-0.343.004.00532
OESOPHAGUSNELFE →-0.746-1.957<.001.00232
BLOOD_LeukemiaAKT1S1 →-0.980-1.864.001<.00132
LUNG_NSCLC_LUADTMEM205 →+1.027+0.532.001.00231
LUNG_NSCLC_LUADSLC26A8 →-0.092-0.576<.001.00531
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0002827 vs CDR2L — LUNG_NSCLC_LUAD

Per-sample scatter of Positive regulation of T-helper 1 type immune response activity vs CDR2L in LUNG_NSCLC_LUAD.

Explore this scatter interactively →

Exploration