Positive regulation of lymphocyte mediated immunity

Across TCGA patient cohorts, RNA activity of the Positive regulation of lymphocyte mediated immunity pathway is significantly associated with the RNA expression of multiple genes, with the LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are RETSAT, CIP2A, and MYO7A, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Positive regulation of lymphocyte mediated immunity activity versus RETSAT in LUAD (Pearson r = -0.26).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUAD	RETSAT →	-0.536	-0.183	<.001	<.001	3	6
LUAD	CIP2A →	+0.634	+0.207	.002	<.001	3	5
LUAD	MYO7A →	+0.456	+0.157	.002	<.001	3	5
LUAD	BNIP3P11 →	+0.607	+0.145	.005	.002	3	5
LUAD	LAG3 →	+0.655	+0.204	<.001	<.001	3	5
HNSC	SGO1 →	+0.514	+0.140	<.001	.004	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0002708 vs RETSAT — LUAD

Explore this scatter interactively →