Positive regulation of production of molecular mediator of immune response

pathway activity — cross-omics
GO:0002702Cross-omicsSHRNA → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Positive regulation of production of molecular mediator of immune response pathway is significantly associated with the RNA expression of multiple genes, with the SKIN cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CRHR2, BCL7A, and COA5, each associated with the pathway in up to 3 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The box plot shows the strongest association, CRHR2 grouped by Positive regulation of production of molecular mediator of immune response-low versus -high activity in SKIN.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINCRHR2 →-0.028-0.155.005.00133
SKINBCL7A →+1.238+0.167.001.00833
LIVERCOA5 →-0.915-0.221.003.00233
LUNG_NSCLC_LUADDHRS4 →-0.686-0.156<.001<.00133
STOMACHMCM4 →+0.644+0.193.003.00233
STOMACHSORBS3 →+1.233+0.224.009.00633
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

CRHR2 by Positive regulation of production of molecular mediator of immune response activity — SKIN

Box plot of CRHR2 in Positive regulation of production of molecular mediator of immune response-low vs -high samples in SKIN.

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Exploration