Negative regulation of leukocyte migration

pathway activity — cross-omics
GO:0002686Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Negative regulation of leukocyte migration pathway is significantly associated with the RNA expression of multiple genes, with the UCEC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are ITGAX, RBMS1P1, and IRAK3, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Negative regulation of leukocyte migration activity versus ITGAX in UCEC (Pearson r = 0.20).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECITGAX →+0.893+0.209<.001<.00135
UCECRBMS1P1 →+0.733+0.205.009.00435
UCECIRAK3 →+1.074+0.265<.001<.00135
UCECGEMIN2 →-0.304-0.127.006.00535
LSCCLILRB3 →+0.775+0.508<.001<.00135
LSCCYEATS4 →-0.877-0.352<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0002686 vs ITGAX — UCEC

Per-sample scatter of Negative regulation of leukocyte migration activity vs ITGAX in UCEC.

Explore this scatter interactively →

Exploration