Respiratory burst involved in inflammatory response

pathway activity — cross-omics
GO:0002536Cross-omicsPROTEIN-MS → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Respiratory burst involved in inflammatory response pathway is significantly associated with the protein abundance of multiple proteins, with the LSCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are ADA2, SKAP2, and VNN2, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCADA2 →+0.626+0.149<.001.00136
OVSKAP2 →+0.555+0.164<.001<.00136
UCECVNN2 →+0.997+0.230<.001.00136
GBMMMP9 →+1.193+0.145<.001<.00136
GBMNCF1 →+0.669+0.171<.001<.00136
GBMNCF4 →+0.598+0.177<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration