Tolerance induction to self antigen

pathway activity — cross-omics
GO:0002513Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Tolerance induction to self antigen pathway is significantly associated with the RNA expression of multiple genes, with the UCEC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are MARCHF1, GSTA9P, and STK17B, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMARCHF1 →+0.523+0.556<.001.00934
OVGSTA9P →-1.388-0.647.001<.00134
LSCCSTK17B →+0.378+0.301.006.00634
CCRCCPREX1 →+0.366+0.534<.001.00434
CCRCCTRAJ10 →+0.922+0.523.001.00734
CCRCCIGHEP2 →+0.335+0.566.001.00234
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration