B cell lineage commitment

pathway activity — cross-omics
GO:0002326Cross-omicsRNA → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the B cell lineage commitment pathway is significantly associated with the RNA expression of multiple genes, with the CHOL cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are MARCHF1, ITGB7, and SLA2, each associated with the pathway in up to 26 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CHOLMARCHF1 →+1.124+0.116<.001.003326
SCLCITGB7 →+1.373+0.236<.001<.001326
DLBCSLA2 →+1.155+0.091<.001<.001326
DLBCFGD2 →+1.654+0.131<.001<.001326
SCLCARHGAP45 →+1.600+0.224<.001<.001326
PAADANKRD44 →+0.899+0.079<.001<.001325
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration