Regulation of oxidative phosphorylation

Across TCGA patient cohorts, RNA activity of the Regulation of oxidative phosphorylation pathway is significantly associated with the protein abundance of multiple proteins, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are TRIR, NUCKS1, and PLIN2, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Regulation of oxidative phosphorylation activity versus TRIR in GBM (Pearson r = -0.26).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	TRIR →	-0.469	-0.052	<.001	<.001	3	4
COAD	NUCKS1 →	-0.567	-0.027	.007	.009	2	5
COAD	PLIN2 →	+0.492	+0.037	.001	.001	3	4
HNSC	RFX7_S202 →	-0.503	-0.055	<.001	.002	3	4
GBM	BRD4 →	-0.253	-0.044	.001	.002	3	4
GBM	CTDSPL2 →	-0.364	-0.041	.004	.003	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0002082 vs TRIR — GBM

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