Columnar/cuboidal epithelial cell maturation

pathway activity — cross-omics
GO:0002069Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Columnar/cuboidal epithelial cell maturation pathway is significantly associated with the protein abundance of multiple proteins, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are TAGLN2, CNOT3_S299, and LEO1_S162, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVTAGLN2 →-0.352-0.050<.001<.00135
COADCNOT3_S299 →+0.495+0.032<.001.00835
COADLEO1_S162 →+0.723+0.031.001.00135
PDACLAMP1 →-0.300-0.033.009.00635
LUADPRC1_T481 →+0.857+0.045<.001<.00135
HNSCTHOC5 →+0.177+0.040<.001.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration