Obsolete protein insertion into mitochondrial membrane involved in apoptotic signaling pathway

pathway activity — cross-omics
GO:0001844Cross-omicsSHRNA → SHRNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Obsolete protein insertion into mitochondrial membrane involved in apoptotic signaling pathway pathway is significantly associated with the shRNA dependency of multiple genes, with the CNS cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are GZMB, BBC3, and NMT1, each associated with the pathway in up to 11 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CNSGZMB →-0.387-0.936<.001<.001311
SKINBBC3 →-0.350-1.057<.001<.001311
LARGE_INTESTINENMT1 →-0.236-0.942.001.00236
CNSBAX →-0.316-0.936<.001.00235
STOMACHCHRDL2 →-0.190-0.298.003.00125
BONEMARCKS →+0.175+0.523.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration