Gastric acid secretion

pathway activity — cross-omics
GO:0001696Cross-omicsPROTEIN-MS → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Gastric acid secretion pathway is significantly associated with the protein abundance of multiple proteins, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are CAVIN1_Y308, KCNQ1_S27, and SOS1_S1275, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMCAVIN1_Y308 →+0.881+1.042.001.00134
LUADKCNQ1_S27 →+1.124+0.620<.001<.00134
GBMSOS1_S1275 →-0.405-0.611<.001<.00133
UCECSPTBN1_S2128 →+0.505+1.079<.001<.00133
UCECTCF4_S318 →+1.179+1.057<.001<.00133
UCECTJP1_S1139 →+0.425+0.732<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration