Sister chromatid segregation

pathway activity — cross-omics
GO:0000819Cross-omicsPROTEIN-MS → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Sister chromatid segregation pathway is significantly associated with the RNA expression of multiple genes, with the PANCREAS cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are ILF3, UHRF1, and MCM10, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Sister chromatid segregation activity versus ILF3 in PANCREAS (Pearson r = 0.58).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PANCREASILF3 →+0.747+0.147<.001.00436
BLOOD_LeukemiaUHRF1 →+1.749+0.157<.001<.00135
PANCREASMCM10 →+1.305+0.203.009.00635
BLOOD_LeukemiaSMC2 →+1.265+0.195<.001<.00135
PANCREASZNF367 →+1.357+0.286.001<.00135
BLOOD_LymphomaSAC3D1 →+0.677+0.133.003.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0000819 vs ILF3 — PANCREAS

Per-sample scatter of Sister chromatid segregation activity vs ILF3 in PANCREAS.

Explore this scatter interactively →

Exploration