Obsolete regulation of transcription involved in G1/S transition of mitotic cell cycle

pathway activity — cross-omics
GO:0000083Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Obsolete regulation of transcription involved in G1/S transition of mitotic cell cycle pathway is significantly associated with the RNA expression of multiple genes, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are MIR181B1, COPB2, and CLN5, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAMIR181B1 →+0.295+0.647.009.00934
CCRCCCOPB2 →+0.227+0.175.007.00933
GBMCLN5 →+0.261+0.216<.001.00324
LUADMEFV →-0.393-0.692.005<.00133
PDACTMTC3 →+0.426+0.855<.001<.00133
PDACATL3 →+0.406+0.825<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

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