Regulation of mitotic recombination

pathway activity — cross-omics
GO:0000019Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Regulation of mitotic recombination pathway is significantly associated with the protein abundance of multiple proteins, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are NOC2L, NAT10, and POLR1E, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Regulation of mitotic recombination activity versus NOC2L in BRCA (Pearson r = 0.38).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCANOC2L →+0.322+0.034.001.00637
BRCANAT10 →+0.259+0.029.002.00137
BRCAPOLR1E →+0.329+0.043.008.00137
LSCCUTP14A →+0.300+0.063.001<.00136
LSCCCEBPZ →+0.430+0.060<.001<.00136
CCRCCNPM1 →+0.250+0.050<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0000019 vs NOC2L — BRCA

Per-sample scatter of Regulation of mitotic recombination activity vs NOC2L in BRCA.

Explore this scatter interactively →

Exploration