ZSWIM9

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ZSWIM9 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,822 significant associations in total. GBM shows the largest number of these associations.

The most reproducible ZSWIM9-associated proteins across cancer lineages are XRCC1, DNAJC1, and TRIM28. Each is linked with ZSWIM9 in more than 5 cancer types. Because this analysis shows association rather than direction, both ZSWIM9-to-partner and partner-to-ZSWIM9 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (ZSWIM9→partner) and Y-score (partner→ZSWIM9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMXRCC1 →+0.350+0.427<.001<.00135
LSCCDNAJC1 →-0.618-0.419<.001<.00135
LSCCTRIM28 →+0.300+0.397.004.00126
GBMRBM12 →+0.279+0.372<.001.00134
PDACRBM12B_S280 →+1.081+0.245.007.00525
LSCCSF3B3 →+0.230+0.427.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,822 associations by consensus.

Exploration